Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga9Q91XX9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdhga9Q91XX9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga9Q91XX9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga9Q91XX9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhga9Q91XX9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhga9Q91XX9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga9Q91XX9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga9Q91XX9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga9Q91XX9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga9Q91XX9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga9Q91XX9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga9Q91XX9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga9Q91XX9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga9Q91XX9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhga9Q91XX9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga9Q91XX9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhga9Q91XX9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdhga9Q91XX9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga9Q91XX9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga9Q91XX9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga9Q91XX9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Pcdhga9Q91XX9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhga9Q91XX9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhga9Q91XX9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhga9Q91XX9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga9Q91XX9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhga9Q91XX9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga9Q91XX9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdhga9Q91XX9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Pcdhga9Q91XX9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdhga9Q91XX9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga9Q91XX9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
Pcdhga9Q91XX9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga9Q91XX9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga9Q91XX9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga9Q91XX9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga9Q91XX9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhga9Q91XX9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga9Q91XX9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga9Q91XX9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdhga9Q91XX9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhga9Q91XX9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga9Q91XX9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdhga9Q91XX9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms