Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgb4Q91XX6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.98■■□□□ 1.11
Pcdhgb4Q91XX6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhgb4Q91XX6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb4Q91XX6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Pcdhgb4Q91XX6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgb4Q91XX6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.98■■□□□ 1.11
Pcdhgb4Q91XX6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdhgb4Q91XX6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Gm5921-201ENSMUST00000075898 882 ntBASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgb4Q91XX6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgb4Q91XX6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdhgb4Q91XX6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb4Q91XX6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb4Q91XX6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb4Q91XX6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb4Q91XX6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgb4Q91XX6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Pcdhgb4Q91XX6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.94■■□□□ 1.1
Pcdhgb4Q91XX6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Pcdhgb4Q91XX6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.93■■□□□ 1.1
Pcdhgb4Q91XX6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhgb4Q91XX6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb4Q91XX6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgb4Q91XX6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcdhgb4Q91XX6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgb4Q91XX6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Gm43566-201ENSMUST00000196851 808 ntBASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdhgb4Q91XX6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Pcdhgb4Q91XX6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Pcdhgb4Q91XX6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhgb4Q91XX6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhgb4Q91XX6 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.88■■□□□ 1.09
Pcdhgb4Q91XX6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Pcdhgb4Q91XX6 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.88■■□□□ 1.09
Pcdhgb4Q91XX6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb4Q91XX6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb4Q91XX6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Pcdhgb4Q91XX6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb4Q91XX6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb4Q91XX6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb4Q91XX6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgb4Q91XX6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgb4Q91XX6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pcdhgb4Q91XX6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgb4Q91XX6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgb4Q91XX6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Pcdhgb4Q91XX6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms