Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkd2Q8VE28 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkd2Q8VE28 Notumos-201ENSMUST00000151998 2659 ntBASIC18.85■□□□□ 0.61
Nkd2Q8VE28 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkd2Q8VE28 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nkd2Q8VE28 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkd2Q8VE28 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkd2Q8VE28 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkd2Q8VE28 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkd2Q8VE28 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkd2Q8VE28 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.83■□□□□ 0.6
Nkd2Q8VE28 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkd2Q8VE28 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkd2Q8VE28 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nkd2Q8VE28 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nkd2Q8VE28 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Gm13241-201ENSMUST00000094493 780 ntBASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd2Q8VE28 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd2Q8VE28 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd2Q8VE28 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd2Q8VE28 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd2Q8VE28 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd2Q8VE28 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd2Q8VE28 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.8■□□□□ 0.6
Nkd2Q8VE28 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd2Q8VE28 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.79■□□□□ 0.6
Nkd2Q8VE28 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd2Q8VE28 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd2Q8VE28 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkd2Q8VE28 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd2Q8VE28 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkd2Q8VE28 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.78■□□□□ 0.6
Nkd2Q8VE28 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd2Q8VE28 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd2Q8VE28 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd2Q8VE28 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nkd2Q8VE28 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkd2Q8VE28 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Gm40881-201ENSMUST00000223397 166 ntBASIC18.76■□□□□ 0.59
Nkd2Q8VE28 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd2Q8VE28 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkd2Q8VE28 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkd2Q8VE28 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkd2Q8VE28 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.75■□□□□ 0.59
Nkd2Q8VE28 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms