Protein–RNA interactions for Protein: Q8R493

Chrnb4, Neuronal acetylcholine receptor subunit beta-4, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb4Q8R493 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chrnb4Q8R493 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrnb4Q8R493 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Chrnb4Q8R493 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Chrnb4Q8R493 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrnb4Q8R493 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrnb4Q8R493 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrnb4Q8R493 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrnb4Q8R493 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrnb4Q8R493 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chrnb4Q8R493 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.36■□□□□ 0.53
Chrnb4Q8R493 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrnb4Q8R493 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Gm10232-201ENSMUST00000089221 720 ntBASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrnb4Q8R493 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrnb4Q8R493 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrnb4Q8R493 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chrnb4Q8R493 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrnb4Q8R493 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrnb4Q8R493 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chrnb4Q8R493 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chrnb4Q8R493 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrnb4Q8R493 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms