Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.28■■□□□ 1.32
Atp2a1Q8R429 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.28■■□□□ 1.32
Atp2a1Q8R429 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.27■■□□□ 1.32
Atp2a1Q8R429 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
Atp2a1Q8R429 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Atp2a1Q8R429 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Atp2a1Q8R429 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Atp2a1Q8R429 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Atp2a1Q8R429 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Atp2a1Q8R429 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Atp2a1Q8R429 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Gm27454-201ENSMUST00000185090 204 ntBASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.25■■□□□ 1.31
Atp2a1Q8R429 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.24■■□□□ 1.31
Atp2a1Q8R429 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Atp2a1Q8R429 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.24■■□□□ 1.31
Atp2a1Q8R429 Gm9870-201ENSMUST00000063874 645 ntBASIC23.24■■□□□ 1.31
Atp2a1Q8R429 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Atp2a1Q8R429 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
Atp2a1Q8R429 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Atp2a1Q8R429 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Atp2a1Q8R429 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Atp2a1Q8R429 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.23■■□□□ 1.31
Atp2a1Q8R429 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.23■■□□□ 1.31
Atp2a1Q8R429 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Atp2a1Q8R429 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Atp2a1Q8R429 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Atp2a1Q8R429 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Atp2a1Q8R429 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Atp2a1Q8R429 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Atp2a1Q8R429 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Atp2a1Q8R429 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Atp2a1Q8R429 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atp2a1Q8R429 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atp2a1Q8R429 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Atp2a1Q8R429 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp2a1Q8R429 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.18■■□□□ 1.3
Atp2a1Q8R429 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Atp2a1Q8R429 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Atp2a1Q8R429 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Atp2a1Q8R429 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Atp2a1Q8R429 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Atp2a1Q8R429 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atp2a1Q8R429 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Atp2a1Q8R429 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.17■■□□□ 1.3
Atp2a1Q8R429 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Atp2a1Q8R429 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Atp2a1Q8R429 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp2a1Q8R429 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp2a1Q8R429 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp2a1Q8R429 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp2a1Q8R429 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.15■■□□□ 1.3
Atp2a1Q8R429 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp2a1Q8R429 Gm45417-201ENSMUST00000209533 758 ntBASIC23.15■■□□□ 1.3
Atp2a1Q8R429 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms