Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln1Q8R317 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln1Q8R317 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln1Q8R317 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln1Q8R317 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.65■□□□□ 0.74
Ubqln1Q8R317 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln1Q8R317 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.65■□□□□ 0.74
Ubqln1Q8R317 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln1Q8R317 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln1Q8R317 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ubqln1Q8R317 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ubqln1Q8R317 Gm5812-201ENSMUST00000061073 957 ntBASIC19.64■□□□□ 0.73
Ubqln1Q8R317 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubqln1Q8R317 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubqln1Q8R317 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Ubqln1Q8R317 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Gm10399-202ENSMUST00000202768 748 ntBASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Ubqln1Q8R317 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln1Q8R317 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubqln1Q8R317 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubqln1Q8R317 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.6■□□□□ 0.73
Ubqln1Q8R317 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.6■□□□□ 0.73
Ubqln1Q8R317 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubqln1Q8R317 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ubqln1Q8R317 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ubqln1Q8R317 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ubqln1Q8R317 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.58■□□□□ 0.72
Ubqln1Q8R317 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.58■□□□□ 0.72
Ubqln1Q8R317 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ubqln1Q8R317 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ubqln1Q8R317 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ubqln1Q8R317 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ubqln1Q8R317 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.58■□□□□ 0.72
Ubqln1Q8R317 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ubqln1Q8R317 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ubqln1Q8R317 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Ubqln1Q8R317 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ubqln1Q8R317 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.56■□□□□ 0.72
Ubqln1Q8R317 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ubqln1Q8R317 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Gm15546-201ENSMUST00000122095 826 ntBASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
Ubqln1Q8R317 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms