Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Chmp7Q8R1T1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
Chmp7Q8R1T1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp7Q8R1T1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp7Q8R1T1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC26.8■■□□□ 1.88
Chmp7Q8R1T1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp7Q8R1T1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp7Q8R1T1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp7Q8R1T1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp7Q8R1T1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Chmp7Q8R1T1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Chmp7Q8R1T1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
Chmp7Q8R1T1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Chmp7Q8R1T1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Gm8770-201ENSMUST00000121113 1109 ntBASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Mir7075-201ENSMUST00000184187 82 ntBASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chmp7Q8R1T1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chmp7Q8R1T1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Chmp7Q8R1T1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chmp7Q8R1T1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Chmp7Q8R1T1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Gm2011-201ENSMUST00000203124 1263 ntBASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chmp7Q8R1T1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chmp7Q8R1T1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Chmp7Q8R1T1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chmp7Q8R1T1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.74■■□□□ 1.87
Chmp7Q8R1T1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chmp7Q8R1T1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Chmp7Q8R1T1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Gm43759-201ENSMUST00000196925 1261 ntBASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Chmp7Q8R1T1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Chmp7Q8R1T1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
Chmp7Q8R1T1 Gm43017-201ENSMUST00000198296 752 ntBASIC26.7■■□□□ 1.86
Chmp7Q8R1T1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Chmp7Q8R1T1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Chmp7Q8R1T1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Chmp7Q8R1T1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chmp7Q8R1T1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Chmp7Q8R1T1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.69■■□□□ 1.86
Chmp7Q8R1T1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC26.69■■□□□ 1.86
Chmp7Q8R1T1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC26.69■■□□□ 1.86
Chmp7Q8R1T1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chmp7Q8R1T1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Gm5576-201ENSMUST00000075809 1236 ntBASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chmp7Q8R1T1 Gm8493-201ENSMUST00000196881 489 ntBASIC26.67■■□□□ 1.86
Chmp7Q8R1T1 Gm21168-201ENSMUST00000199646 1096 ntBASIC26.67■■□□□ 1.86
Chmp7Q8R1T1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Chmp7Q8R1T1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms