Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml1Q8K558 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml1Q8K558 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.5■□□□□ 0.87
Treml1Q8K558 Rps24-207ENSMUST00000224568 714 ntBASIC20.5■□□□□ 0.87
Treml1Q8K558 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml1Q8K558 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml1Q8K558 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Treml1Q8K558 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml1Q8K558 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Treml1Q8K558 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Treml1Q8K558 Gm10399-202ENSMUST00000202768 748 ntBASIC20.49■□□□□ 0.87
Treml1Q8K558 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.49■□□□□ 0.87
Treml1Q8K558 Gm40881-201ENSMUST00000223397 166 ntBASIC20.49■□□□□ 0.87
Treml1Q8K558 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Treml1Q8K558 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Treml1Q8K558 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Treml1Q8K558 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.49■□□□□ 0.87
Treml1Q8K558 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Treml1Q8K558 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Treml1Q8K558 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml1Q8K558 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml1Q8K558 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Treml1Q8K558 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.48■□□□□ 0.87
Treml1Q8K558 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml1Q8K558 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml1Q8K558 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.48■□□□□ 0.87
Treml1Q8K558 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.48■□□□□ 0.87
Treml1Q8K558 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Treml1Q8K558 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.47■□□□□ 0.87
Treml1Q8K558 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Treml1Q8K558 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Treml1Q8K558 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Treml1Q8K558 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Treml1Q8K558 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Treml1Q8K558 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.46■□□□□ 0.87
Treml1Q8K558 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Treml1Q8K558 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Treml1Q8K558 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Treml1Q8K558 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Treml1Q8K558 Gm45102-201ENSMUST00000207427 857 ntBASIC20.46■□□□□ 0.87
Treml1Q8K558 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.46■□□□□ 0.87
Treml1Q8K558 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Treml1Q8K558 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Treml1Q8K558 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Treml1Q8K558 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Treml1Q8K558 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Treml1Q8K558 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Treml1Q8K558 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Treml1Q8K558 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Treml1Q8K558 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.44■□□□□ 0.86
Treml1Q8K558 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Treml1Q8K558 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Treml1Q8K558 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Treml1Q8K558 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Treml1Q8K558 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Treml1Q8K558 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Treml1Q8K558 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Treml1Q8K558 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Treml1Q8K558 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Treml1Q8K558 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Treml1Q8K558 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Treml1Q8K558 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Treml1Q8K558 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.41■□□□□ 0.86
Treml1Q8K558 Gm7417-201ENSMUST00000192950 473 ntBASIC20.41■□□□□ 0.86
Treml1Q8K558 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Treml1Q8K558 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Treml1Q8K558 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.41■□□□□ 0.86
Treml1Q8K558 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Treml1Q8K558 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.4■□□□□ 0.86
Treml1Q8K558 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.4■□□□□ 0.86
Treml1Q8K558 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Treml1Q8K558 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Treml1Q8K558 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Treml1Q8K558 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Treml1Q8K558 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Treml1Q8K558 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Treml1Q8K558 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Treml1Q8K558 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Treml1Q8K558 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Treml1Q8K558 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Treml1Q8K558 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Treml1Q8K558 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Treml1Q8K558 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.38■□□□□ 0.85
Treml1Q8K558 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.38■□□□□ 0.85
Treml1Q8K558 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Treml1Q8K558 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Treml1Q8K558 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.37■□□□□ 0.85
Treml1Q8K558 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Treml1Q8K558 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms