Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC27.73■■■□□ 2.03
Ddx54Q8K4L0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Ddx54Q8K4L0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Ddx54Q8K4L0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC27.72■■■□□ 2.03
Ddx54Q8K4L0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC27.72■■■□□ 2.03
Ddx54Q8K4L0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ddx54Q8K4L0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC27.72■■■□□ 2.03
Ddx54Q8K4L0 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.72■■■□□ 2.03
Ddx54Q8K4L0 Gm4430-201ENSMUST00000192413 1943 ntBASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx54Q8K4L0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Ddx54Q8K4L0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
Ddx54Q8K4L0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC27.7■■■□□ 2.02
Ddx54Q8K4L0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Ddx54Q8K4L0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ddx54Q8K4L0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC27.69■■■□□ 2.02
Ddx54Q8K4L0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 AV356131-201ENSMUST00000206201 750 ntBASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx54Q8K4L0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC27.67■■■□□ 2.02
Ddx54Q8K4L0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Gm6934-201ENSMUST00000194780 1905 ntBASIC27.66■■■□□ 2.02
Ddx54Q8K4L0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 Gm7143-201ENSMUST00000222811 859 ntBASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 Gm10602-201ENSMUST00000098239 609 ntBASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ddx54Q8K4L0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ddx54Q8K4L0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC27.64■■■□□ 2.02
Ddx54Q8K4L0 Gm10033-202ENSMUST00000211874 928 ntBASIC27.64■■■□□ 2.02
Ddx54Q8K4L0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC27.63■■■□□ 2.01
Ddx54Q8K4L0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ddx54Q8K4L0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ddx54Q8K4L0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Ddx54Q8K4L0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ddx54Q8K4L0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ddx54Q8K4L0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ddx54Q8K4L0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx54Q8K4L0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC27.61■■■□□ 2.01
Ddx54Q8K4L0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC27.61■■■□□ 2.01
Ddx54Q8K4L0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx54Q8K4L0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx54Q8K4L0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx54Q8K4L0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx54Q8K4L0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx54Q8K4L0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx54Q8K4L0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx54Q8K4L0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx54Q8K4L0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx54Q8K4L0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ddx54Q8K4L0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ddx54Q8K4L0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
Ddx54Q8K4L0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ddx54Q8K4L0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC27.57■■■□□ 2
Ddx54Q8K4L0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Ddx54Q8K4L0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Ddx54Q8K4L0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC27.57■■■□□ 2
Ddx54Q8K4L0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC27.57■■■□□ 2
Ddx54Q8K4L0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ddx54Q8K4L0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ddx54Q8K4L0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC27.56■■■□□ 2
Ddx54Q8K4L0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC27.56■■■□□ 2
Ddx54Q8K4L0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms