Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn1Q8K445 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn1Q8K445 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn1Q8K445 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn1Q8K445 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn1Q8K445 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.61■□□□□ 0.73
Clrn1Q8K445 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.61■□□□□ 0.73
Clrn1Q8K445 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
Clrn1Q8K445 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn1Q8K445 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn1Q8K445 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.6■□□□□ 0.73
Clrn1Q8K445 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn1Q8K445 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn1Q8K445 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn1Q8K445 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.6■□□□□ 0.73
Clrn1Q8K445 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.6■□□□□ 0.73
Clrn1Q8K445 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.6■□□□□ 0.73
Clrn1Q8K445 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Clrn1Q8K445 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn1Q8K445 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn1Q8K445 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn1Q8K445 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn1Q8K445 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.59■□□□□ 0.73
Clrn1Q8K445 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn1Q8K445 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn1Q8K445 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Clrn1Q8K445 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.59■□□□□ 0.73
Clrn1Q8K445 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clrn1Q8K445 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clrn1Q8K445 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Clrn1Q8K445 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clrn1Q8K445 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
Clrn1Q8K445 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clrn1Q8K445 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.58■□□□□ 0.72
Clrn1Q8K445 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.58■□□□□ 0.72
Clrn1Q8K445 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.57■□□□□ 0.72
Clrn1Q8K445 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn1Q8K445 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn1Q8K445 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn1Q8K445 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn1Q8K445 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.57■□□□□ 0.72
Clrn1Q8K445 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn1Q8K445 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn1Q8K445 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Clrn1Q8K445 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn1Q8K445 Gm15546-201ENSMUST00000122095 826 ntBASIC19.56■□□□□ 0.72
Clrn1Q8K445 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn1Q8K445 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn1Q8K445 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.55■□□□□ 0.72
Clrn1Q8K445 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Gm10399-202ENSMUST00000202768 748 ntBASIC19.55■□□□□ 0.72
Clrn1Q8K445 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn1Q8K445 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.55■□□□□ 0.72
Clrn1Q8K445 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn1Q8K445 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.54■□□□□ 0.72
Clrn1Q8K445 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn1Q8K445 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn1Q8K445 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Clrn1Q8K445 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Clrn1Q8K445 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.54■□□□□ 0.72
Clrn1Q8K445 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Clrn1Q8K445 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.53■□□□□ 0.72
Clrn1Q8K445 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn1Q8K445 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn1Q8K445 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Clrn1Q8K445 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn1Q8K445 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn1Q8K445 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn1Q8K445 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clrn1Q8K445 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn1Q8K445 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms