Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgcs1Q8JZK9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.81■□□□□ 0.76
Hmgcs1Q8JZK9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgcs1Q8JZK9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcs1Q8JZK9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcs1Q8JZK9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcs1Q8JZK9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmgcs1Q8JZK9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hmgcs1Q8JZK9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmgcs1Q8JZK9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hmgcs1Q8JZK9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgcs1Q8JZK9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgcs1Q8JZK9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgcs1Q8JZK9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgcs1Q8JZK9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgcs1Q8JZK9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgcs1Q8JZK9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgcs1Q8JZK9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgcs1Q8JZK9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgcs1Q8JZK9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.71■□□□□ 0.75
Hmgcs1Q8JZK9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms