Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.49■□□□□ 0.71
Rfwd3Q8CIK8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd3Q8CIK8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd3Q8CIK8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Rfwd3Q8CIK8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Gm10399-202ENSMUST00000202768 748 ntBASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd3Q8CIK8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rfwd3Q8CIK8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd3Q8CIK8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rfwd3Q8CIK8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd3Q8CIK8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd3Q8CIK8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd3Q8CIK8 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.45■□□□□ 0.7
Rfwd3Q8CIK8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rfwd3Q8CIK8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd3Q8CIK8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd3Q8CIK8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd3Q8CIK8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.42■□□□□ 0.7
Rfwd3Q8CIK8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Gm40881-201ENSMUST00000223397 166 ntBASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfwd3Q8CIK8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfwd3Q8CIK8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfwd3Q8CIK8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Rfwd3Q8CIK8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Gm9959-201ENSMUST00000068277 390 ntBASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfwd3Q8CIK8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms