Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h3Q8CHP0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.71■□□□□ 0.91
Zc3h3Q8CHP0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.71■□□□□ 0.91
Zc3h3Q8CHP0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zc3h3Q8CHP0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Zc3h3Q8CHP0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zc3h3Q8CHP0 Gm10033-202ENSMUST00000211874 928 ntBASIC20.71■□□□□ 0.91
Zc3h3Q8CHP0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zc3h3Q8CHP0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zc3h3Q8CHP0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.7■□□□□ 0.9
Zc3h3Q8CHP0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.7■□□□□ 0.9
Zc3h3Q8CHP0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.7■□□□□ 0.9
Zc3h3Q8CHP0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h3Q8CHP0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h3Q8CHP0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.69■□□□□ 0.9
Zc3h3Q8CHP0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h3Q8CHP0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h3Q8CHP0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Zc3h3Q8CHP0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3h3Q8CHP0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Zc3h3Q8CHP0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3h3Q8CHP0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Zc3h3Q8CHP0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3h3Q8CHP0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Zc3h3Q8CHP0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.68■□□□□ 0.9
Zc3h3Q8CHP0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3h3Q8CHP0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h3Q8CHP0 Gm42778-201ENSMUST00000199644 553 ntBASIC20.66■□□□□ 0.9
Zc3h3Q8CHP0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.66■□□□□ 0.9
Zc3h3Q8CHP0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3h3Q8CHP0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Gm7143-201ENSMUST00000222811 859 ntBASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3h3Q8CHP0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3h3Q8CHP0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3h3Q8CHP0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3h3Q8CHP0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.63■□□□□ 0.89
Zc3h3Q8CHP0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3h3Q8CHP0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3h3Q8CHP0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3h3Q8CHP0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3h3Q8CHP0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3h3Q8CHP0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h3Q8CHP0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h3Q8CHP0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h3Q8CHP0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.6■□□□□ 0.89
Zc3h3Q8CHP0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3h3Q8CHP0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Zc3h3Q8CHP0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h3Q8CHP0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h3Q8CHP0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3h3Q8CHP0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.58■□□□□ 0.89
Zc3h3Q8CHP0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h3Q8CHP0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3h3Q8CHP0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h3Q8CHP0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms