Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ShfQ8CG80 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ShfQ8CG80 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShfQ8CG80 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShfQ8CG80 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ShfQ8CG80 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShfQ8CG80 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ShfQ8CG80 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.54■□□□□ 0.56
ShfQ8CG80 Gm12366-201ENSMUST00000121722 873 ntBASIC18.54■□□□□ 0.56
ShfQ8CG80 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.54■□□□□ 0.56
ShfQ8CG80 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.54■□□□□ 0.56
ShfQ8CG80 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.54■□□□□ 0.56
ShfQ8CG80 Gm5786-201ENSMUST00000085368 882 ntBASIC18.54■□□□□ 0.56
ShfQ8CG80 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ShfQ8CG80 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShfQ8CG80 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShfQ8CG80 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShfQ8CG80 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.53■□□□□ 0.56
ShfQ8CG80 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShfQ8CG80 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.53■□□□□ 0.56
ShfQ8CG80 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ShfQ8CG80 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.53■□□□□ 0.56
ShfQ8CG80 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ShfQ8CG80 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ShfQ8CG80 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShfQ8CG80 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ShfQ8CG80 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShfQ8CG80 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ShfQ8CG80 Notumos-201ENSMUST00000151998 2659 ntBASIC18.52■□□□□ 0.55
ShfQ8CG80 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ShfQ8CG80 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShfQ8CG80 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShfQ8CG80 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShfQ8CG80 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.51■□□□□ 0.55
ShfQ8CG80 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShfQ8CG80 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShfQ8CG80 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ShfQ8CG80 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShfQ8CG80 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.5■□□□□ 0.55
ShfQ8CG80 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.5■□□□□ 0.55
ShfQ8CG80 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ShfQ8CG80 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ShfQ8CG80 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
ShfQ8CG80 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ShfQ8CG80 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShfQ8CG80 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShfQ8CG80 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
ShfQ8CG80 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShfQ8CG80 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ShfQ8CG80 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ShfQ8CG80 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShfQ8CG80 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShfQ8CG80 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ShfQ8CG80 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.49■□□□□ 0.55
ShfQ8CG80 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShfQ8CG80 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ShfQ8CG80 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ShfQ8CG80 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ShfQ8CG80 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShfQ8CG80 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ShfQ8CG80 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
ShfQ8CG80 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShfQ8CG80 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms