Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Rab43Q8CG50 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.32■□□□□ 0.84
Rab43Q8CG50 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab43Q8CG50 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab43Q8CG50 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab43Q8CG50 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Rab43Q8CG50 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.31■□□□□ 0.84
Rab43Q8CG50 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab43Q8CG50 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rab43Q8CG50 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Rab43Q8CG50 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab43Q8CG50 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab43Q8CG50 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rab43Q8CG50 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rab43Q8CG50 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rab43Q8CG50 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rab43Q8CG50 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Gm43137-201ENSMUST00000198052 594 ntBASIC20.29■□□□□ 0.84
Rab43Q8CG50 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rab43Q8CG50 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab43Q8CG50 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rab43Q8CG50 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab43Q8CG50 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab43Q8CG50 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.27■□□□□ 0.84
Rab43Q8CG50 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab43Q8CG50 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rab43Q8CG50 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rab43Q8CG50 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab43Q8CG50 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rab43Q8CG50 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rab43Q8CG50 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.26■□□□□ 0.83
Rab43Q8CG50 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.26■□□□□ 0.83
Rab43Q8CG50 Gm7143-201ENSMUST00000222811 859 ntBASIC20.26■□□□□ 0.83
Rab43Q8CG50 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Gm6139-201ENSMUST00000079261 882 ntBASIC20.26■□□□□ 0.83
Rab43Q8CG50 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab43Q8CG50 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab43Q8CG50 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab43Q8CG50 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab43Q8CG50 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab43Q8CG50 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rab43Q8CG50 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.25■□□□□ 0.83
Rab43Q8CG50 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rab43Q8CG50 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab43Q8CG50 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Rab43Q8CG50 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab43Q8CG50 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab43Q8CG50 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab43Q8CG50 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.22■□□□□ 0.83
Rab43Q8CG50 Mir7075-201ENSMUST00000184187 82 ntBASIC20.22■□□□□ 0.83
Rab43Q8CG50 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.22■□□□□ 0.83
Rab43Q8CG50 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab43Q8CG50 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab43Q8CG50 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab43Q8CG50 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab43Q8CG50 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rab43Q8CG50 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab43Q8CG50 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rab43Q8CG50 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab43Q8CG50 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab43Q8CG50 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Rab43Q8CG50 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms