Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim9Q8C7M3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim9Q8C7M3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim9Q8C7M3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim9Q8C7M3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Trim9Q8C7M3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Trim9Q8C7M3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim9Q8C7M3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Trim9Q8C7M3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim9Q8C7M3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23■■□□□ 1.27
Trim9Q8C7M3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23■■□□□ 1.27
Trim9Q8C7M3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23■■□□□ 1.27
Trim9Q8C7M3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Trim9Q8C7M3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim9Q8C7M3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.99■■□□□ 1.27
Trim9Q8C7M3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.99■■□□□ 1.27
Trim9Q8C7M3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim9Q8C7M3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim9Q8C7M3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim9Q8C7M3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim9Q8C7M3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim9Q8C7M3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim9Q8C7M3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim9Q8C7M3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim9Q8C7M3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Gm10399-202ENSMUST00000202768 748 ntBASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim9Q8C7M3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.96■■□□□ 1.27
Trim9Q8C7M3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Trim9Q8C7M3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.95■■□□□ 1.26
Trim9Q8C7M3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim9Q8C7M3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.94■■□□□ 1.26
Trim9Q8C7M3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim9Q8C7M3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim9Q8C7M3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim9Q8C7M3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim9Q8C7M3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim9Q8C7M3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim9Q8C7M3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trim9Q8C7M3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Trim9Q8C7M3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim9Q8C7M3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trim9Q8C7M3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Gm5812-201ENSMUST00000061073 957 ntBASIC22.91■■□□□ 1.26
Trim9Q8C7M3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms