Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a6Q8C6K9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col6a6Q8C6K9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a6Q8C6K9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Col6a6Q8C6K9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a6Q8C6K9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a6Q8C6K9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a6Q8C6K9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a6Q8C6K9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.9■□□□□ 0.62
Col6a6Q8C6K9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a6Q8C6K9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col6a6Q8C6K9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a6Q8C6K9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col6a6Q8C6K9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Col6a6Q8C6K9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a6Q8C6K9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Col6a6Q8C6K9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a6Q8C6K9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col6a6Q8C6K9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a6Q8C6K9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a6Q8C6K9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a6Q8C6K9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a6Q8C6K9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a6Q8C6K9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a6Q8C6K9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col6a6Q8C6K9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a6Q8C6K9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a6Q8C6K9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a6Q8C6K9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a6Q8C6K9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a6Q8C6K9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a6Q8C6K9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.82■□□□□ 0.6
Col6a6Q8C6K9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a6Q8C6K9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Col6a6Q8C6K9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a6Q8C6K9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
Col6a6Q8C6K9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a6Q8C6K9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Col6a6Q8C6K9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a6Q8C6K9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.8■□□□□ 0.6
Col6a6Q8C6K9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col6a6Q8C6K9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Col6a6Q8C6K9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Col6a6Q8C6K9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a6Q8C6K9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms