Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc60Q8C4J0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.62■■□□□ 1.85
Ccdc60Q8C4J0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc60Q8C4J0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc60Q8C4J0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc60Q8C4J0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc60Q8C4J0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc60Q8C4J0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc60Q8C4J0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc60Q8C4J0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ccdc60Q8C4J0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ccdc60Q8C4J0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.6■■□□□ 1.85
Ccdc60Q8C4J0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.6■■□□□ 1.85
Ccdc60Q8C4J0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 Gm14117-201ENSMUST00000122417 843 ntBASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 Gm45102-201ENSMUST00000207427 857 ntBASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 Rps24-207ENSMUST00000224568 714 ntBASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ccdc60Q8C4J0 Gm13042-201ENSMUST00000119244 1955 ntBASIC26.58■■□□□ 1.85
Ccdc60Q8C4J0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ccdc60Q8C4J0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ccdc60Q8C4J0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Ccdc60Q8C4J0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ccdc60Q8C4J0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ccdc60Q8C4J0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
Ccdc60Q8C4J0 Gm12504-201ENSMUST00000120860 2231 ntBASIC26.57■■□□□ 1.84
Ccdc60Q8C4J0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Ccdc60Q8C4J0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ccdc60Q8C4J0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 Gm7417-201ENSMUST00000192950 473 ntBASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.55■■□□□ 1.84
Ccdc60Q8C4J0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc60Q8C4J0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.53■■□□□ 1.84
Ccdc60Q8C4J0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ccdc60Q8C4J0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.53■■□□□ 1.84
Ccdc60Q8C4J0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc60Q8C4J0 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.53■■□□□ 1.84
Ccdc60Q8C4J0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc60Q8C4J0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.52■■□□□ 1.84
Ccdc60Q8C4J0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.52■■□□□ 1.84
Ccdc60Q8C4J0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.52■■□□□ 1.84
Ccdc60Q8C4J0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc60Q8C4J0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc60Q8C4J0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc60Q8C4J0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.51■■□□□ 1.83
Ccdc60Q8C4J0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc60Q8C4J0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc60Q8C4J0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc60Q8C4J0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc60Q8C4J0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc60Q8C4J0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc60Q8C4J0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc60Q8C4J0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc60Q8C4J0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc60Q8C4J0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc60Q8C4J0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc60Q8C4J0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc60Q8C4J0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc60Q8C4J0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Gm44949-201ENSMUST00000206423 1450 ntBASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc60Q8C4J0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
Ccdc60Q8C4J0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc60Q8C4J0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.47■■□□□ 1.83
Ccdc60Q8C4J0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc60Q8C4J0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC26.47■■□□□ 1.83
Ccdc60Q8C4J0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc60Q8C4J0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc60Q8C4J0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ccdc60Q8C4J0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC26.45■■□□□ 1.82
Ccdc60Q8C4J0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ccdc60Q8C4J0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms