Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc90bQ8C3X2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.04■□□□□ 0.8
Ccdc90bQ8C3X2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc90bQ8C3X2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc90bQ8C3X2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc90bQ8C3X2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc90bQ8C3X2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc90bQ8C3X2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc90bQ8C3X2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc90bQ8C3X2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc90bQ8C3X2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc90bQ8C3X2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc90bQ8C3X2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Ccdc90bQ8C3X2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc90bQ8C3X2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc90bQ8C3X2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc90bQ8C3X2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.98■□□□□ 0.79
Ccdc90bQ8C3X2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc90bQ8C3X2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ccdc90bQ8C3X2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc90bQ8C3X2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.98■□□□□ 0.79
Ccdc90bQ8C3X2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc90bQ8C3X2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc90bQ8C3X2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc90bQ8C3X2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms