Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps9d1Q8C190 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps9d1Q8C190 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vps9d1Q8C190 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps9d1Q8C190 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps9d1Q8C190 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vps9d1Q8C190 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.35■□□□□ 0.69
Vps9d1Q8C190 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps9d1Q8C190 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps9d1Q8C190 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps9d1Q8C190 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vps9d1Q8C190 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Vps9d1Q8C190 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps9d1Q8C190 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps9d1Q8C190 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps9d1Q8C190 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps9d1Q8C190 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Notumos-201ENSMUST00000151998 2659 ntBASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Gm10420-201ENSMUST00000121713 882 ntBASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps9d1Q8C190 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps9d1Q8C190 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vps9d1Q8C190 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps9d1Q8C190 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps9d1Q8C190 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps9d1Q8C190 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps9d1Q8C190 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps9d1Q8C190 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps9d1Q8C190 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps9d1Q8C190 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vps9d1Q8C190 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps9d1Q8C190 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.28■□□□□ 0.68
Vps9d1Q8C190 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps9d1Q8C190 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps9d1Q8C190 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps9d1Q8C190 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps9d1Q8C190 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Vps9d1Q8C190 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps9d1Q8C190 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps9d1Q8C190 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.27■□□□□ 0.67
Vps9d1Q8C190 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vps9d1Q8C190 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps9d1Q8C190 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps9d1Q8C190 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps9d1Q8C190 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps9d1Q8C190 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps9d1Q8C190 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps9d1Q8C190 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Vps9d1Q8C190 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps9d1Q8C190 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps9d1Q8C190 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps9d1Q8C190 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps9d1Q8C190 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps9d1Q8C190 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps9d1Q8C190 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vps9d1Q8C190 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps9d1Q8C190 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps9d1Q8C190 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps9d1Q8C190 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms