Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.13■□□□□ 0.97
Usp43Q8BUM9 Gm10399-202ENSMUST00000202768 748 ntBASIC21.13■□□□□ 0.97
Usp43Q8BUM9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp43Q8BUM9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Usp43Q8BUM9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.12■□□□□ 0.97
Usp43Q8BUM9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp43Q8BUM9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Usp43Q8BUM9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.11■□□□□ 0.97
Usp43Q8BUM9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp43Q8BUM9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.11■□□□□ 0.97
Usp43Q8BUM9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Gm5812-201ENSMUST00000061073 957 ntBASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp43Q8BUM9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp43Q8BUM9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp43Q8BUM9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp43Q8BUM9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp43Q8BUM9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp43Q8BUM9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp43Q8BUM9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp43Q8BUM9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.06■□□□□ 0.96
Usp43Q8BUM9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.06■□□□□ 0.96
Usp43Q8BUM9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp43Q8BUM9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp43Q8BUM9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp43Q8BUM9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp43Q8BUM9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp43Q8BUM9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp43Q8BUM9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp43Q8BUM9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp43Q8BUM9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp43Q8BUM9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.04■□□□□ 0.96
Usp43Q8BUM9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp43Q8BUM9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp43Q8BUM9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Usp43Q8BUM9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp43Q8BUM9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp43Q8BUM9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp43Q8BUM9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Usp43Q8BUM9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Usp43Q8BUM9 Gm15820-201ENSMUST00000201566 728 ntBASIC21.02■□□□□ 0.96
Usp43Q8BUM9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp43Q8BUM9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp43Q8BUM9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp43Q8BUM9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp43Q8BUM9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.01■□□□□ 0.95
Usp43Q8BUM9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Usp43Q8BUM9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp43Q8BUM9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp43Q8BUM9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Gm15546-201ENSMUST00000122095 826 ntBASIC21■□□□□ 0.95
Usp43Q8BUM9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 Gm4430-201ENSMUST00000192413 1943 ntBASIC21■□□□□ 0.95
Usp43Q8BUM9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp43Q8BUM9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp43Q8BUM9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms