Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Golgb1-201ENSMUST00000023534 498 ntBASIC21.13■□□□□ 0.97
Ubr7Q8BU04 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ubr7Q8BU04 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Gm9870-201ENSMUST00000063874 645 ntBASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr7Q8BU04 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ubr7Q8BU04 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr7Q8BU04 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr7Q8BU04 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr7Q8BU04 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.11■□□□□ 0.97
Ubr7Q8BU04 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Ubr7Q8BU04 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr7Q8BU04 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr7Q8BU04 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr7Q8BU04 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.1■□□□□ 0.97
Ubr7Q8BU04 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr7Q8BU04 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr7Q8BU04 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr7Q8BU04 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr7Q8BU04 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr7Q8BU04 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr7Q8BU04 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr7Q8BU04 Gm7143-201ENSMUST00000222811 859 ntBASIC21.08■□□□□ 0.97
Ubr7Q8BU04 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr7Q8BU04 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.08■□□□□ 0.96
Ubr7Q8BU04 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubr7Q8BU04 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.08■□□□□ 0.96
Ubr7Q8BU04 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Ubr7Q8BU04 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr7Q8BU04 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr7Q8BU04 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.04■□□□□ 0.96
Ubr7Q8BU04 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ubr7Q8BU04 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr7Q8BU04 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr7Q8BU04 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr7Q8BU04 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.04■□□□□ 0.96
Ubr7Q8BU04 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.03■□□□□ 0.96
Ubr7Q8BU04 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Ubr7Q8BU04 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubr7Q8BU04 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.03■□□□□ 0.96
Ubr7Q8BU04 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubr7Q8BU04 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms