Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf7Q8BTV2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf7Q8BTV2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf7Q8BTV2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf7Q8BTV2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf7Q8BTV2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf7Q8BTV2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf7Q8BTV2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf7Q8BTV2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cpsf7Q8BTV2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf7Q8BTV2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf7Q8BTV2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf7Q8BTV2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.78■□□□□ 0.92
Cpsf7Q8BTV2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf7Q8BTV2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf7Q8BTV2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf7Q8BTV2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf7Q8BTV2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf7Q8BTV2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cpsf7Q8BTV2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cpsf7Q8BTV2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.76■□□□□ 0.91
Cpsf7Q8BTV2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf7Q8BTV2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf7Q8BTV2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf7Q8BTV2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf7Q8BTV2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf7Q8BTV2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf7Q8BTV2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf7Q8BTV2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf7Q8BTV2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf7Q8BTV2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.73■□□□□ 0.91
Cpsf7Q8BTV2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf7Q8BTV2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf7Q8BTV2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf7Q8BTV2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf7Q8BTV2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Golph3-202ENSMUST00000226517 2359 ntBASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf7Q8BTV2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Gm27502-201ENSMUST00000183495 199 ntBASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf7Q8BTV2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Gm12366-201ENSMUST00000121722 873 ntBASIC20.69■□□□□ 0.9
Cpsf7Q8BTV2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms