Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf18Q8BM39 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf18Q8BM39 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf18Q8BM39 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf18Q8BM39 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf18Q8BM39 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Prpf18Q8BM39 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf18Q8BM39 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf18Q8BM39 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf18Q8BM39 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf18Q8BM39 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf18Q8BM39 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf18Q8BM39 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf18Q8BM39 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf18Q8BM39 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.58■□□□□ 0.72
Prpf18Q8BM39 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf18Q8BM39 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf18Q8BM39 Iqck-206ENSMUST00000208658 2891 ntBASIC19.58■□□□□ 0.72
Prpf18Q8BM39 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
Prpf18Q8BM39 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf18Q8BM39 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf18Q8BM39 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf18Q8BM39 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf18Q8BM39 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.57■□□□□ 0.72
Prpf18Q8BM39 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf18Q8BM39 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf18Q8BM39 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Mir6538-201ENSMUST00000183713 110 ntBASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf18Q8BM39 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf18Q8BM39 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf18Q8BM39 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf18Q8BM39 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Prpf18Q8BM39 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.54■□□□□ 0.72
Prpf18Q8BM39 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf18Q8BM39 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Gm27502-201ENSMUST00000183495 199 ntBASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.53■□□□□ 0.72
Prpf18Q8BM39 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Prpf18Q8BM39 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.52■□□□□ 0.72
Prpf18Q8BM39 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf18Q8BM39 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf18Q8BM39 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf18Q8BM39 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf18Q8BM39 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf18Q8BM39 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf18Q8BM39 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf18Q8BM39 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf18Q8BM39 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf18Q8BM39 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms