Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm4Q8BKA3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Srrm4Q8BKA3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srrm4Q8BKA3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm4Q8BKA3 Rps24-207ENSMUST00000224568 714 ntBASIC18■□□□□ 0.47
Srrm4Q8BKA3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm4Q8BKA3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm4Q8BKA3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18■□□□□ 0.47
Srrm4Q8BKA3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18■□□□□ 0.47
Srrm4Q8BKA3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm4Q8BKA3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Gm10399-202ENSMUST00000202768 748 ntBASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm4Q8BKA3 Gm14117-201ENSMUST00000122417 843 ntBASIC17.97■□□□□ 0.47
Srrm4Q8BKA3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srrm4Q8BKA3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Srrm4Q8BKA3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Srrm4Q8BKA3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srrm4Q8BKA3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srrm4Q8BKA3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Srrm4Q8BKA3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Srrm4Q8BKA3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.96■□□□□ 0.47
Srrm4Q8BKA3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Srrm4Q8BKA3 Etf1-202ENSMUST00000180351 108 ntBASIC17.96■□□□□ 0.47
Srrm4Q8BKA3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.96■□□□□ 0.47
Srrm4Q8BKA3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Srrm4Q8BKA3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Srrm4Q8BKA3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Srrm4Q8BKA3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Srrm4Q8BKA3 Gm40881-201ENSMUST00000223397 166 ntBASIC17.94■□□□□ 0.46
Srrm4Q8BKA3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Srrm4Q8BKA3 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.94■□□□□ 0.46
Srrm4Q8BKA3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Srrm4Q8BKA3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.92■□□□□ 0.46
Srrm4Q8BKA3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Srrm4Q8BKA3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms