Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.19■□□□□ 0.98
Chmp2bQ8BJF9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.19■□□□□ 0.98
Chmp2bQ8BJF9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.19■□□□□ 0.98
Chmp2bQ8BJF9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp2bQ8BJF9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Chmp2bQ8BJF9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp2bQ8BJF9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp2bQ8BJF9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp2bQ8BJF9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp2bQ8BJF9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chmp2bQ8BJF9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp2bQ8BJF9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Chmp2bQ8BJF9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chmp2bQ8BJF9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Gm12366-201ENSMUST00000121722 873 ntBASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Gm5786-201ENSMUST00000085368 882 ntBASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Iqck-206ENSMUST00000208658 2891 ntBASIC21.14■□□□□ 0.97
Chmp2bQ8BJF9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chmp2bQ8BJF9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp2bQ8BJF9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.13■□□□□ 0.97
Chmp2bQ8BJF9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chmp2bQ8BJF9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp2bQ8BJF9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Chmp2bQ8BJF9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp2bQ8BJF9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp2bQ8BJF9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp2bQ8BJF9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp2bQ8BJF9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp2bQ8BJF9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp2bQ8BJF9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Gm10420-201ENSMUST00000121713 882 ntBASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp2bQ8BJF9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp2bQ8BJF9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp2bQ8BJF9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp2bQ8BJF9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Chmp2bQ8BJF9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms