Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim23Q8BGX0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim23Q8BGX0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.09■□□□□ 0.81
Trim23Q8BGX0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim23Q8BGX0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
Trim23Q8BGX0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim23Q8BGX0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trim23Q8BGX0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim23Q8BGX0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim23Q8BGX0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim23Q8BGX0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim23Q8BGX0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim23Q8BGX0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim23Q8BGX0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim23Q8BGX0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim23Q8BGX0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim23Q8BGX0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.08■□□□□ 0.8
Trim23Q8BGX0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim23Q8BGX0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim23Q8BGX0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim23Q8BGX0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim23Q8BGX0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim23Q8BGX0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.06■□□□□ 0.8
Trim23Q8BGX0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim23Q8BGX0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim23Q8BGX0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.05■□□□□ 0.8
Trim23Q8BGX0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim23Q8BGX0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim23Q8BGX0 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.04■□□□□ 0.8
Trim23Q8BGX0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim23Q8BGX0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim23Q8BGX0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim23Q8BGX0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim23Q8BGX0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim23Q8BGX0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim23Q8BGX0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim23Q8BGX0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim23Q8BGX0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim23Q8BGX0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim23Q8BGX0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim23Q8BGX0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20■□□□□ 0.79
Trim23Q8BGX0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20■□□□□ 0.79
Trim23Q8BGX0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Trim23Q8BGX0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim23Q8BGX0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20■□□□□ 0.79
Trim23Q8BGX0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim23Q8BGX0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim23Q8BGX0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20■□□□□ 0.79
Trim23Q8BGX0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim23Q8BGX0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim23Q8BGX0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim23Q8BGX0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim23Q8BGX0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim23Q8BGX0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim23Q8BGX0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim23Q8BGX0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim23Q8BGX0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim23Q8BGX0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim23Q8BGX0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms