Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smndc1Q8BGT7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Smndc1Q8BGT7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smndc1Q8BGT7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smndc1Q8BGT7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smndc1Q8BGT7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smndc1Q8BGT7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smndc1Q8BGT7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Smndc1Q8BGT7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smndc1Q8BGT7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smndc1Q8BGT7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.93■□□□□ 0.78
Smndc1Q8BGT7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Smndc1Q8BGT7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smndc1Q8BGT7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smndc1Q8BGT7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Smndc1Q8BGT7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Smndc1Q8BGT7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smndc1Q8BGT7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smndc1Q8BGT7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smndc1Q8BGT7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smndc1Q8BGT7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smndc1Q8BGT7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smndc1Q8BGT7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smndc1Q8BGT7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smndc1Q8BGT7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smndc1Q8BGT7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smndc1Q8BGT7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smndc1Q8BGT7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smndc1Q8BGT7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smndc1Q8BGT7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smndc1Q8BGT7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smndc1Q8BGT7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smndc1Q8BGT7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smndc1Q8BGT7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smndc1Q8BGT7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.89■□□□□ 0.77
Smndc1Q8BGT7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smndc1Q8BGT7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smndc1Q8BGT7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smndc1Q8BGT7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smndc1Q8BGT7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smndc1Q8BGT7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smndc1Q8BGT7 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.88■□□□□ 0.77
Smndc1Q8BGT7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Smndc1Q8BGT7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.86■□□□□ 0.77
Smndc1Q8BGT7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smndc1Q8BGT7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smndc1Q8BGT7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smndc1Q8BGT7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smndc1Q8BGT7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smndc1Q8BGT7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smndc1Q8BGT7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smndc1Q8BGT7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smndc1Q8BGT7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smndc1Q8BGT7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smndc1Q8BGT7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smndc1Q8BGT7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Smndc1Q8BGT7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.85■□□□□ 0.77
Smndc1Q8BGT7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smndc1Q8BGT7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smndc1Q8BGT7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smndc1Q8BGT7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smndc1Q8BGT7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smndc1Q8BGT7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smndc1Q8BGT7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smndc1Q8BGT7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Smndc1Q8BGT7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smndc1Q8BGT7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms