Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf40bQ80W14 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf40bQ80W14 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf40bQ80W14 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf40bQ80W14 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Prpf40bQ80W14 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40bQ80W14 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Prpf40bQ80W14 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf40bQ80W14 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf40bQ80W14 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40bQ80W14 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Gm6139-201ENSMUST00000079261 882 ntBASIC23.93■■□□□ 1.42
Prpf40bQ80W14 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.93■■□□□ 1.42
Prpf40bQ80W14 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40bQ80W14 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.92■■□□□ 1.42
Prpf40bQ80W14 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.92■■□□□ 1.42
Prpf40bQ80W14 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Prpf40bQ80W14 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40bQ80W14 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40bQ80W14 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40bQ80W14 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Prpf40bQ80W14 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40bQ80W14 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40bQ80W14 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40bQ80W14 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.91■■□□□ 1.42
Prpf40bQ80W14 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.91■■□□□ 1.42
Prpf40bQ80W14 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Prpf40bQ80W14 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40bQ80W14 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.9■■□□□ 1.42
Prpf40bQ80W14 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Prpf40bQ80W14 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Prpf40bQ80W14 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Prpf40bQ80W14 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Prpf40bQ80W14 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.9■■□□□ 1.42
Prpf40bQ80W14 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Prpf40bQ80W14 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Prpf40bQ80W14 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.9■■□□□ 1.42
Prpf40bQ80W14 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.89■■□□□ 1.42
Prpf40bQ80W14 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Prpf40bQ80W14 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Prpf40bQ80W14 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Prpf40bQ80W14 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Prpf40bQ80W14 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.89■■□□□ 1.41
Prpf40bQ80W14 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Prpf40bQ80W14 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
Prpf40bQ80W14 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Prpf40bQ80W14 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Prpf40bQ80W14 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40bQ80W14 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.88■■□□□ 1.41
Prpf40bQ80W14 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Prpf40bQ80W14 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40bQ80W14 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40bQ80W14 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Prpf40bQ80W14 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.85■■□□□ 1.41
Prpf40bQ80W14 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prpf40bQ80W14 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Prpf40bQ80W14 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Prpf40bQ80W14 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
Prpf40bQ80W14 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms