Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm15546-201ENSMUST00000122095 826 ntBASIC20.89■□□□□ 0.93
Rpp38Q80UU2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.89■□□□□ 0.93
Rpp38Q80UU2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpp38Q80UU2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rpp38Q80UU2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpp38Q80UU2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp38Q80UU2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp38Q80UU2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp38Q80UU2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.88■□□□□ 0.93
Rpp38Q80UU2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp38Q80UU2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.88■□□□□ 0.93
Rpp38Q80UU2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp38Q80UU2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp38Q80UU2 Gm15820-201ENSMUST00000201566 728 ntBASIC20.86■□□□□ 0.93
Rpp38Q80UU2 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.86■□□□□ 0.93
Rpp38Q80UU2 Gm40881-201ENSMUST00000223397 166 ntBASIC20.86■□□□□ 0.93
Rpp38Q80UU2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp38Q80UU2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rpp38Q80UU2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp38Q80UU2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp38Q80UU2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp38Q80UU2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp38Q80UU2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rpp38Q80UU2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.84■□□□□ 0.93
Rpp38Q80UU2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp38Q80UU2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rpp38Q80UU2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp38Q80UU2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpp38Q80UU2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpp38Q80UU2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.83■□□□□ 0.93
Rpp38Q80UU2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpp38Q80UU2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.83■□□□□ 0.93
Rpp38Q80UU2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpp38Q80UU2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpp38Q80UU2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Rpp38Q80UU2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rpp38Q80UU2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpp38Q80UU2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpp38Q80UU2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp38Q80UU2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp38Q80UU2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp38Q80UU2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp38Q80UU2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp38Q80UU2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp38Q80UU2 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.8■□□□□ 0.92
Rpp38Q80UU2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp38Q80UU2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rpp38Q80UU2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.79■□□□□ 0.92
Rpp38Q80UU2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.79■□□□□ 0.92
Rpp38Q80UU2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpp38Q80UU2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp38Q80UU2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.77■□□□□ 0.92
Rpp38Q80UU2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rpp38Q80UU2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp38Q80UU2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp38Q80UU2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp38Q80UU2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.77■□□□□ 0.92
Rpp38Q80UU2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rpp38Q80UU2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rpp38Q80UU2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpp38Q80UU2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.76■□□□□ 0.91
Rpp38Q80UU2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.76■□□□□ 0.91
Rpp38Q80UU2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rpp38Q80UU2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpp38Q80UU2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms