Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh19Q80TF3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh19Q80TF3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh19Q80TF3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh19Q80TF3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh19Q80TF3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh19Q80TF3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh19Q80TF3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh19Q80TF3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh19Q80TF3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
Pcdh19Q80TF3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh19Q80TF3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh19Q80TF3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh19Q80TF3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Pcdh19Q80TF3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh19Q80TF3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh19Q80TF3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh19Q80TF3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh19Q80TF3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh19Q80TF3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Golgb1-201ENSMUST00000023534 498 ntBASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh19Q80TF3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh19Q80TF3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh19Q80TF3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh19Q80TF3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh19Q80TF3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh19Q80TF3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh19Q80TF3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh19Q80TF3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh19Q80TF3 Gm21956-201ENSMUST00000179946 522 ntBASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 Gm9870-201ENSMUST00000063874 645 ntBASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh19Q80TF3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdh19Q80TF3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh19Q80TF3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Pcdh19Q80TF3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdh19Q80TF3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh19Q80TF3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh19Q80TF3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh19Q80TF3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh19Q80TF3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh19Q80TF3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh19Q80TF3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdh19Q80TF3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh19Q80TF3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdh19Q80TF3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh19Q80TF3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh19Q80TF3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh19Q80TF3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms