Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.87■□□□□ 0.29
Vma21Q78T54 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.87■□□□□ 0.29
Vma21Q78T54 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Vma21Q78T54 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.87■□□□□ 0.29
Vma21Q78T54 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vma21Q78T54 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Vma21Q78T54 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vma21Q78T54 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.86■□□□□ 0.29
Vma21Q78T54 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vma21Q78T54 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.86■□□□□ 0.29
Vma21Q78T54 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.86■□□□□ 0.29
Vma21Q78T54 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vma21Q78T54 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vma21Q78T54 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vma21Q78T54 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vma21Q78T54 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.86■□□□□ 0.29
Vma21Q78T54 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vma21Q78T54 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Vma21Q78T54 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vma21Q78T54 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vma21Q78T54 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vma21Q78T54 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.85■□□□□ 0.29
Vma21Q78T54 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vma21Q78T54 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.85■□□□□ 0.29
Vma21Q78T54 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.85■□□□□ 0.29
Vma21Q78T54 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vma21Q78T54 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vma21Q78T54 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vma21Q78T54 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vma21Q78T54 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vma21Q78T54 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.84■□□□□ 0.29
Vma21Q78T54 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vma21Q78T54 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vma21Q78T54 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Vma21Q78T54 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vma21Q78T54 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vma21Q78T54 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vma21Q78T54 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vma21Q78T54 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vma21Q78T54 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.83■□□□□ 0.28
Vma21Q78T54 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vma21Q78T54 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vma21Q78T54 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vma21Q78T54 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vma21Q78T54 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.82■□□□□ 0.28
Vma21Q78T54 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vma21Q78T54 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vma21Q78T54 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.82■□□□□ 0.28
Vma21Q78T54 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.82■□□□□ 0.28
Vma21Q78T54 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Vma21Q78T54 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vma21Q78T54 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vma21Q78T54 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vma21Q78T54 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vma21Q78T54 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vma21Q78T54 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vma21Q78T54 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Vma21Q78T54 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vma21Q78T54 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vma21Q78T54 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vma21Q78T54 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vma21Q78T54 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vma21Q78T54 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.81■□□□□ 0.28
Vma21Q78T54 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vma21Q78T54 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.8■□□□□ 0.28
Vma21Q78T54 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vma21Q78T54 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Vma21Q78T54 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Vma21Q78T54 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vma21Q78T54 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vma21Q78T54 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.79■□□□□ 0.28
Vma21Q78T54 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vma21Q78T54 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vma21Q78T54 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vma21Q78T54 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.79■□□□□ 0.28
Vma21Q78T54 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vma21Q78T54 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vma21Q78T54 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vma21Q78T54 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Vma21Q78T54 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms