Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
Ddx58Q6Q899 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx58Q6Q899 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx58Q6Q899 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx58Q6Q899 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx58Q6Q899 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx58Q6Q899 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.9■■□□□ 1.74
Ddx58Q6Q899 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx58Q6Q899 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.89■■□□□ 1.74
Ddx58Q6Q899 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.89■■□□□ 1.74
Ddx58Q6Q899 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx58Q6Q899 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx58Q6Q899 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx58Q6Q899 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Ddx58Q6Q899 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Ddx58Q6Q899 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx58Q6Q899 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx58Q6Q899 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx58Q6Q899 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Ddx58Q6Q899 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx58Q6Q899 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx58Q6Q899 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx58Q6Q899 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx58Q6Q899 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ddx58Q6Q899 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ddx58Q6Q899 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Ddx58Q6Q899 Gm27454-201ENSMUST00000185090 204 ntBASIC25.85■■□□□ 1.73
Ddx58Q6Q899 Gm9207-201ENSMUST00000198773 1115 ntBASIC25.85■■□□□ 1.73
Ddx58Q6Q899 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ddx58Q6Q899 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ddx58Q6Q899 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx58Q6Q899 Gm10657-201ENSMUST00000193528 1031 ntBASIC25.84■■□□□ 1.73
Ddx58Q6Q899 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx58Q6Q899 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx58Q6Q899 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx58Q6Q899 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx58Q6Q899 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.83■■□□□ 1.73
Ddx58Q6Q899 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx58Q6Q899 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Krt8-ps-201ENSMUST00000208495 945 ntBASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx58Q6Q899 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx58Q6Q899 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx58Q6Q899 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx58Q6Q899 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx58Q6Q899 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx58Q6Q899 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ddx58Q6Q899 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ddx58Q6Q899 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ddx58Q6Q899 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
Ddx58Q6Q899 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.78■■□□□ 1.72
Ddx58Q6Q899 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ddx58Q6Q899 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ddx58Q6Q899 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Ddx58Q6Q899 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.77■■□□□ 1.72
Ddx58Q6Q899 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ddx58Q6Q899 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ddx58Q6Q899 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ddx58Q6Q899 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Ddx58Q6Q899 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx58Q6Q899 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx58Q6Q899 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.75■■□□□ 1.71
Ddx58Q6Q899 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx58Q6Q899 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx58Q6Q899 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx58Q6Q899 Gm45417-201ENSMUST00000209533 758 ntBASIC25.75■■□□□ 1.71
Ddx58Q6Q899 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx58Q6Q899 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx58Q6Q899 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms