Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim45Q6PFY8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim45Q6PFY8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Etf1-202ENSMUST00000180351 108 ntBASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim45Q6PFY8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.54■□□□□ 0.72
Trim45Q6PFY8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim45Q6PFY8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim45Q6PFY8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim45Q6PFY8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim45Q6PFY8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trim45Q6PFY8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim45Q6PFY8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim45Q6PFY8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim45Q6PFY8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Trim45Q6PFY8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim45Q6PFY8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim45Q6PFY8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim45Q6PFY8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim45Q6PFY8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim45Q6PFY8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.5■□□□□ 0.71
Trim45Q6PFY8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim45Q6PFY8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.5■□□□□ 0.71
Trim45Q6PFY8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim45Q6PFY8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim45Q6PFY8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim45Q6PFY8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim45Q6PFY8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim45Q6PFY8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim45Q6PFY8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.48■□□□□ 0.71
Trim45Q6PFY8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.48■□□□□ 0.71
Trim45Q6PFY8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim45Q6PFY8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim45Q6PFY8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim45Q6PFY8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim45Q6PFY8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms