Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd3Q6P9Z1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd3Q6P9Z1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd3Q6P9Z1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd3Q6P9Z1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd3Q6P9Z1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd3Q6P9Z1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd3Q6P9Z1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd3Q6P9Z1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smarcd3Q6P9Z1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd3Q6P9Z1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd3Q6P9Z1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd3Q6P9Z1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smarcd3Q6P9Z1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd3Q6P9Z1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd3Q6P9Z1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd3Q6P9Z1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd3Q6P9Z1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd3Q6P9Z1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd3Q6P9Z1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd3Q6P9Z1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd3Q6P9Z1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Gm12366-201ENSMUST00000121722 873 ntBASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd3Q6P9Z1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms