Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ParpbpQ6IRT3 Gm10232-201ENSMUST00000089221 720 ntBASIC19.45■□□□□ 0.7
ParpbpQ6IRT3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ParpbpQ6IRT3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ParpbpQ6IRT3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ParpbpQ6IRT3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ParpbpQ6IRT3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ParpbpQ6IRT3 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.44■□□□□ 0.7
ParpbpQ6IRT3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ParpbpQ6IRT3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ParpbpQ6IRT3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ParpbpQ6IRT3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ParpbpQ6IRT3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ParpbpQ6IRT3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ParpbpQ6IRT3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ParpbpQ6IRT3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.43■□□□□ 0.7
ParpbpQ6IRT3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ParpbpQ6IRT3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ParpbpQ6IRT3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ParpbpQ6IRT3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ParpbpQ6IRT3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.4■□□□□ 0.7
ParpbpQ6IRT3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ParpbpQ6IRT3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ParpbpQ6IRT3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
ParpbpQ6IRT3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.39■□□□□ 0.69
ParpbpQ6IRT3 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.39■□□□□ 0.69
ParpbpQ6IRT3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.39■□□□□ 0.69
ParpbpQ6IRT3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ParpbpQ6IRT3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ParpbpQ6IRT3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ParpbpQ6IRT3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ParpbpQ6IRT3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.38■□□□□ 0.69
ParpbpQ6IRT3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ParpbpQ6IRT3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ParpbpQ6IRT3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ParpbpQ6IRT3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
ParpbpQ6IRT3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ParpbpQ6IRT3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ParpbpQ6IRT3 Gm15546-201ENSMUST00000122095 826 ntBASIC19.37■□□□□ 0.69
ParpbpQ6IRT3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ParpbpQ6IRT3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ParpbpQ6IRT3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.35■□□□□ 0.69
ParpbpQ6IRT3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ParpbpQ6IRT3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ParpbpQ6IRT3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ParpbpQ6IRT3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ParpbpQ6IRT3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ParpbpQ6IRT3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ParpbpQ6IRT3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ParpbpQ6IRT3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ParpbpQ6IRT3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ParpbpQ6IRT3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
ParpbpQ6IRT3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ParpbpQ6IRT3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ParpbpQ6IRT3 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.33■□□□□ 0.68
ParpbpQ6IRT3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ParpbpQ6IRT3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ParpbpQ6IRT3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.33■□□□□ 0.68
ParpbpQ6IRT3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ParpbpQ6IRT3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ParpbpQ6IRT3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ParpbpQ6IRT3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ParpbpQ6IRT3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.32■□□□□ 0.68
ParpbpQ6IRT3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.32■□□□□ 0.68
ParpbpQ6IRT3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ParpbpQ6IRT3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ParpbpQ6IRT3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ParpbpQ6IRT3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.31■□□□□ 0.68
ParpbpQ6IRT3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms