Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lcn3Q62471 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.84■□□□□ 0.45
Lcn3Q62471 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lcn3Q62471 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lcn3Q62471 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lcn3Q62471 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lcn3Q62471 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lcn3Q62471 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lcn3Q62471 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Lcn3Q62471 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lcn3Q62471 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lcn3Q62471 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lcn3Q62471 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.82■□□□□ 0.44
Lcn3Q62471 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Lcn3Q62471 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Lcn3Q62471 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lcn3Q62471 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lcn3Q62471 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lcn3Q62471 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.82■□□□□ 0.44
Lcn3Q62471 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.82■□□□□ 0.44
Lcn3Q62471 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lcn3Q62471 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lcn3Q62471 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lcn3Q62471 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Lcn3Q62471 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.81■□□□□ 0.44
Lcn3Q62471 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Lcn3Q62471 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lcn3Q62471 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.81■□□□□ 0.44
Lcn3Q62471 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lcn3Q62471 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lcn3Q62471 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lcn3Q62471 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lcn3Q62471 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lcn3Q62471 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.8■□□□□ 0.44
Lcn3Q62471 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lcn3Q62471 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lcn3Q62471 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Lcn3Q62471 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lcn3Q62471 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lcn3Q62471 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lcn3Q62471 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lcn3Q62471 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Lcn3Q62471 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lcn3Q62471 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.79■□□□□ 0.44
Lcn3Q62471 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lcn3Q62471 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.78■□□□□ 0.44
Lcn3Q62471 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcn3Q62471 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcn3Q62471 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcn3Q62471 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcn3Q62471 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcn3Q62471 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lcn3Q62471 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcn3Q62471 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcn3Q62471 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lcn3Q62471 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.77■□□□□ 0.44
Lcn3Q62471 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Lcn3Q62471 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcn3Q62471 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.77■□□□□ 0.43
Lcn3Q62471 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lcn3Q62471 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcn3Q62471 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcn3Q62471 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.76■□□□□ 0.43
Lcn3Q62471 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Lcn3Q62471 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lcn3Q62471 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcn3Q62471 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcn3Q62471 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lcn3Q62471 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcn3Q62471 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcn3Q62471 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lcn3Q62471 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.75■□□□□ 0.43
Lcn3Q62471 Gm4799-201ENSMUST00000095396 657 ntBASIC17.75■□□□□ 0.43
Lcn3Q62471 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcn3Q62471 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcn3Q62471 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcn3Q62471 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lcn3Q62471 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Lcn3Q62471 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Lcn3Q62471 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcn3Q62471 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcn3Q62471 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcn3Q62471 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcn3Q62471 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcn3Q62471 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.74■□□□□ 0.43
Lcn3Q62471 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcn3Q62471 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
Lcn3Q62471 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.74■□□□□ 0.43
Lcn3Q62471 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms