Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rai1Q61818 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.45■□□□□ 0.86
Rai1Q61818 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Rai1Q61818 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.45■□□□□ 0.86
Rai1Q61818 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.45■□□□□ 0.86
Rai1Q61818 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rai1Q61818 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rai1Q61818 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rai1Q61818 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rai1Q61818 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rai1Q61818 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rai1Q61818 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rai1Q61818 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.43■□□□□ 0.86
Rai1Q61818 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.43■□□□□ 0.86
Rai1Q61818 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rai1Q61818 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rai1Q61818 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rai1Q61818 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rai1Q61818 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rai1Q61818 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rai1Q61818 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rai1Q61818 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rai1Q61818 Mir7075-201ENSMUST00000184187 82 ntBASIC20.42■□□□□ 0.86
Rai1Q61818 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.42■□□□□ 0.86
Rai1Q61818 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rai1Q61818 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rai1Q61818 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rai1Q61818 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rai1Q61818 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Rai1Q61818 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rai1Q61818 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.41■□□□□ 0.86
Rai1Q61818 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rai1Q61818 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.41■□□□□ 0.86
Rai1Q61818 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rai1Q61818 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rai1Q61818 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rai1Q61818 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rai1Q61818 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rai1Q61818 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rai1Q61818 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rai1Q61818 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rai1Q61818 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rai1Q61818 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rai1Q61818 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rai1Q61818 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Rai1Q61818 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rai1Q61818 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.39■□□□□ 0.86
Rai1Q61818 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rai1Q61818 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rai1Q61818 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rai1Q61818 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.39■□□□□ 0.85
Rai1Q61818 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rai1Q61818 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Rai1Q61818 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rai1Q61818 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rai1Q61818 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rai1Q61818 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Rai1Q61818 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rai1Q61818 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rai1Q61818 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rai1Q61818 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rai1Q61818 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.37■□□□□ 0.85
Rai1Q61818 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.37■□□□□ 0.85
Rai1Q61818 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.37■□□□□ 0.85
Rai1Q61818 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rai1Q61818 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.37■□□□□ 0.85
Rai1Q61818 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rai1Q61818 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.36■□□□□ 0.85
Rai1Q61818 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rai1Q61818 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rai1Q61818 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.36■□□□□ 0.85
Rai1Q61818 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rai1Q61818 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rai1Q61818 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.35■□□□□ 0.85
Rai1Q61818 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.35■□□□□ 0.85
Rai1Q61818 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rai1Q61818 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rai1Q61818 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rai1Q61818 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rai1Q61818 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rai1Q61818 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rai1Q61818 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.34■□□□□ 0.85
Rai1Q61818 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rai1Q61818 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.33■□□□□ 0.85
Rai1Q61818 Gm7143-201ENSMUST00000222811 859 ntBASIC20.33■□□□□ 0.85
Rai1Q61818 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rai1Q61818 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rai1Q61818 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rai1Q61818 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.33■□□□□ 0.84
Rai1Q61818 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.33■□□□□ 0.84
Rai1Q61818 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rai1Q61818 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rai1Q61818 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms