Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Six4Q61321 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six4Q61321 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Six4Q61321 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.09■□□□□ 0.97
Six4Q61321 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Six4Q61321 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Six4Q61321 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Six4Q61321 Gm14117-201ENSMUST00000122417 843 ntBASIC21.08■□□□□ 0.97
Six4Q61321 Etf1-202ENSMUST00000180351 108 ntBASIC21.08■□□□□ 0.97
Six4Q61321 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.08■□□□□ 0.97
Six4Q61321 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.08■□□□□ 0.97
Six4Q61321 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Six4Q61321 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Six4Q61321 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Six4Q61321 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Six4Q61321 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Six4Q61321 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six4Q61321 Gm45102-201ENSMUST00000207427 857 ntBASIC21.06■□□□□ 0.96
Six4Q61321 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.06■□□□□ 0.96
Six4Q61321 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six4Q61321 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six4Q61321 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six4Q61321 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.05■□□□□ 0.96
Six4Q61321 Rps24-207ENSMUST00000224568 714 ntBASIC21.05■□□□□ 0.96
Six4Q61321 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six4Q61321 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.05■□□□□ 0.96
Six4Q61321 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six4Q61321 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.04■□□□□ 0.96
Six4Q61321 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.04■□□□□ 0.96
Six4Q61321 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
Six4Q61321 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six4Q61321 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six4Q61321 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six4Q61321 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.03■□□□□ 0.96
Six4Q61321 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.03■□□□□ 0.96
Six4Q61321 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six4Q61321 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six4Q61321 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six4Q61321 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Six4Q61321 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six4Q61321 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six4Q61321 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six4Q61321 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Six4Q61321 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.02■□□□□ 0.96
Six4Q61321 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.02■□□□□ 0.96
Six4Q61321 Gm7417-201ENSMUST00000192950 473 ntBASIC21.02■□□□□ 0.96
Six4Q61321 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Six4Q61321 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Six4Q61321 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Six4Q61321 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Six4Q61321 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six4Q61321 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six4Q61321 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six4Q61321 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Six4Q61321 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six4Q61321 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six4Q61321 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Six4Q61321 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.01■□□□□ 0.95
Six4Q61321 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.01■□□□□ 0.95
Six4Q61321 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.01■□□□□ 0.95
Six4Q61321 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Six4Q61321 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21■□□□□ 0.95
Six4Q61321 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Six4Q61321 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six4Q61321 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six4Q61321 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six4Q61321 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six4Q61321 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six4Q61321 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
Six4Q61321 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Six4Q61321 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six4Q61321 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six4Q61321 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Six4Q61321 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six4Q61321 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six4Q61321 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six4Q61321 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six4Q61321 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six4Q61321 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six4Q61321 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.97■□□□□ 0.95
Six4Q61321 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Six4Q61321 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six4Q61321 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six4Q61321 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.96■□□□□ 0.95
Six4Q61321 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six4Q61321 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms