Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sdf4Q61112 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sdf4Q61112 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Sdf4Q61112 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sdf4Q61112 Gm15546-201ENSMUST00000122095 826 ntBASIC21.09■□□□□ 0.97
Sdf4Q61112 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sdf4Q61112 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.09■□□□□ 0.97
Sdf4Q61112 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Sdf4Q61112 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdf4Q61112 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.08■□□□□ 0.97
Sdf4Q61112 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.08■□□□□ 0.97
Sdf4Q61112 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.08■□□□□ 0.97
Sdf4Q61112 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdf4Q61112 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Sdf4Q61112 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sdf4Q61112 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdf4Q61112 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Sdf4Q61112 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sdf4Q61112 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdf4Q61112 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.07■□□□□ 0.96
Sdf4Q61112 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sdf4Q61112 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sdf4Q61112 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdf4Q61112 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.06■□□□□ 0.96
Sdf4Q61112 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.06■□□□□ 0.96
Sdf4Q61112 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdf4Q61112 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Sdf4Q61112 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdf4Q61112 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdf4Q61112 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.05■□□□□ 0.96
Sdf4Q61112 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.05■□□□□ 0.96
Sdf4Q61112 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sdf4Q61112 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sdf4Q61112 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sdf4Q61112 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.05■□□□□ 0.96
Sdf4Q61112 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.05■□□□□ 0.96
Sdf4Q61112 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sdf4Q61112 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdf4Q61112 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sdf4Q61112 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdf4Q61112 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdf4Q61112 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sdf4Q61112 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdf4Q61112 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sdf4Q61112 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdf4Q61112 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdf4Q61112 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.03■□□□□ 0.96
Sdf4Q61112 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.03■□□□□ 0.96
Sdf4Q61112 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdf4Q61112 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdf4Q61112 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdf4Q61112 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sdf4Q61112 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdf4Q61112 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdf4Q61112 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sdf4Q61112 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sdf4Q61112 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Sdf4Q61112 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.01■□□□□ 0.95
Sdf4Q61112 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdf4Q61112 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.01■□□□□ 0.95
Sdf4Q61112 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdf4Q61112 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sdf4Q61112 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sdf4Q61112 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdf4Q61112 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sdf4Q61112 Gm40881-201ENSMUST00000223397 166 ntBASIC21■□□□□ 0.95
Sdf4Q61112 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdf4Q61112 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sdf4Q61112 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sdf4Q61112 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sdf4Q61112 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sdf4Q61112 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdf4Q61112 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdf4Q61112 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.99■□□□□ 0.95
Sdf4Q61112 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdf4Q61112 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdf4Q61112 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sdf4Q61112 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdf4Q61112 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdf4Q61112 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sdf4Q61112 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.98■□□□□ 0.95
Sdf4Q61112 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdf4Q61112 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdf4Q61112 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdf4Q61112 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdf4Q61112 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.98■□□□□ 0.95
Sdf4Q61112 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sdf4Q61112 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
Sdf4Q61112 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sdf4Q61112 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms