Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Col12a1Q60847 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.13■□□□□ 0.97
Col12a1Q60847 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col12a1Q60847 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col12a1Q60847 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.12■□□□□ 0.97
Col12a1Q60847 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col12a1Q60847 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col12a1Q60847 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col12a1Q60847 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col12a1Q60847 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col12a1Q60847 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col12a1Q60847 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.11■□□□□ 0.97
Col12a1Q60847 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.11■□□□□ 0.97
Col12a1Q60847 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.11■□□□□ 0.97
Col12a1Q60847 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Col12a1Q60847 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.1■□□□□ 0.97
Col12a1Q60847 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.1■□□□□ 0.97
Col12a1Q60847 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col12a1Q60847 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Col12a1Q60847 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Col12a1Q60847 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.09■□□□□ 0.97
Col12a1Q60847 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Col12a1Q60847 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.09■□□□□ 0.97
Col12a1Q60847 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col12a1Q60847 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col12a1Q60847 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col12a1Q60847 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.08■□□□□ 0.97
Col12a1Q60847 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col12a1Q60847 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col12a1Q60847 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col12a1Q60847 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col12a1Q60847 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col12a1Q60847 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col12a1Q60847 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col12a1Q60847 Gm40848-201ENSMUST00000221998 324 ntBASIC21.07■□□□□ 0.96
Col12a1Q60847 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col12a1Q60847 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col12a1Q60847 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Col12a1Q60847 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.07■□□□□ 0.96
Col12a1Q60847 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col12a1Q60847 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col12a1Q60847 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col12a1Q60847 Gm26833-201ENSMUST00000180899 440 ntBASIC21.06■□□□□ 0.96
Col12a1Q60847 Gm10252-201ENSMUST00000209541 832 ntBASIC21.06■□□□□ 0.96
Col12a1Q60847 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col12a1Q60847 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.06■□□□□ 0.96
Col12a1Q60847 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.06■□□□□ 0.96
Col12a1Q60847 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col12a1Q60847 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.05■□□□□ 0.96
Col12a1Q60847 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Col12a1Q60847 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.05■□□□□ 0.96
Col12a1Q60847 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col12a1Q60847 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col12a1Q60847 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Col12a1Q60847 AV356131-201ENSMUST00000206201 750 ntBASIC21.04■□□□□ 0.96
Col12a1Q60847 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col12a1Q60847 Nespas-201ENSMUST00000143738 1083 ntBASIC21.04■□□□□ 0.96
Col12a1Q60847 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col12a1Q60847 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.04■□□□□ 0.96
Col12a1Q60847 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col12a1Q60847 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col12a1Q60847 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.04■□□□□ 0.96
Col12a1Q60847 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col12a1Q60847 Gm18671-201ENSMUST00000214826 683 ntBASIC21.03■□□□□ 0.96
Col12a1Q60847 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col12a1Q60847 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col12a1Q60847 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col12a1Q60847 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col12a1Q60847 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.02■□□□□ 0.96
Col12a1Q60847 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col12a1Q60847 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col12a1Q60847 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.02■□□□□ 0.96
Col12a1Q60847 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Col12a1Q60847 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col12a1Q60847 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.02■□□□□ 0.95
Col12a1Q60847 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.02■□□□□ 0.95
Col12a1Q60847 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col12a1Q60847 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.01■□□□□ 0.95
Col12a1Q60847 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col12a1Q60847 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.01■□□□□ 0.95
Col12a1Q60847 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col12a1Q60847 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.01■□□□□ 0.95
Col12a1Q60847 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col12a1Q60847 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21■□□□□ 0.95
Col12a1Q60847 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Col12a1Q60847 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21■□□□□ 0.95
Col12a1Q60847 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col12a1Q60847 Gm10602-201ENSMUST00000098239 609 ntBASIC21■□□□□ 0.95
Col12a1Q60847 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col12a1Q60847 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col12a1Q60847 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Col12a1Q60847 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col12a1Q60847 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms