Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfaip3Q60769 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfaip3Q60769 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfaip3Q60769 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Tnfaip3Q60769 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfaip3Q60769 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfaip3Q60769 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfaip3Q60769 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tnfaip3Q60769 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfaip3Q60769 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfaip3Q60769 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Tnfaip3Q60769 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfaip3Q60769 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfaip3Q60769 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfaip3Q60769 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfaip3Q60769 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfaip3Q60769 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfaip3Q60769 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfaip3Q60769 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfaip3Q60769 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfaip3Q60769 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tnfaip3Q60769 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfaip3Q60769 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfaip3Q60769 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.49■□□□□ 0.71
Tnfaip3Q60769 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfaip3Q60769 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.49■□□□□ 0.71
Tnfaip3Q60769 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfaip3Q60769 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Tnfaip3Q60769 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfaip3Q60769 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfaip3Q60769 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfaip3Q60769 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfaip3Q60769 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfaip3Q60769 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfaip3Q60769 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfaip3Q60769 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.44■□□□□ 0.7
Tnfaip3Q60769 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfaip3Q60769 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfaip3Q60769 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Tnfaip3Q60769 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfaip3Q60769 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfaip3Q60769 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Tnfaip3Q60769 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.43■□□□□ 0.7
Tnfaip3Q60769 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms