Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-1Q5R1H8 Golph3-202ENSMUST00000226517 2359 ntBASIC16.89■□□□□ 0.3
Trav8d-1Q5R1H8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Gm12366-201ENSMUST00000121722 873 ntBASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Gm5786-201ENSMUST00000085368 882 ntBASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav8d-1Q5R1H8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Cap2-205ENSMUST00000225824 1634 ntBASIC16.88■□□□□ 0.29
Trav8d-1Q5R1H8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Gm14523-201ENSMUST00000117260 558 ntBASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Gm7332-201ENSMUST00000118351 454 ntBASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav8d-1Q5R1H8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Gm27502-201ENSMUST00000183495 199 ntBASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav8d-1Q5R1H8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8d-1Q5R1H8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8d-1Q5R1H8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav8d-1Q5R1H8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav8d-1Q5R1H8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-1Q5R1H8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav8d-1Q5R1H8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8d-1Q5R1H8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav8d-1Q5R1H8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav8d-1Q5R1H8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-1Q5R1H8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-1Q5R1H8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-1Q5R1H8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8d-1Q5R1H8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-1Q5R1H8 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms