Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Frem3Q5H8B9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Frem3Q5H8B9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Frem3Q5H8B9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Frem3Q5H8B9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Frem3Q5H8B9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Frem3Q5H8B9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Frem3Q5H8B9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.36■■□□□ 1.01
Frem3Q5H8B9 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.35■■□□□ 1.01
Frem3Q5H8B9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Frem3Q5H8B9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.35■■□□□ 1.01
Frem3Q5H8B9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Frem3Q5H8B9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Frem3Q5H8B9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Frem3Q5H8B9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Frem3Q5H8B9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Frem3Q5H8B9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Frem3Q5H8B9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Frem3Q5H8B9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Frem3Q5H8B9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Frem3Q5H8B9 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.34■■□□□ 1.01
Frem3Q5H8B9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Frem3Q5H8B9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Frem3Q5H8B9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Frem3Q5H8B9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Frem3Q5H8B9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.32■■□□□ 1
Frem3Q5H8B9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.32■■□□□ 1
Frem3Q5H8B9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Frem3Q5H8B9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.32■■□□□ 1
Frem3Q5H8B9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frem3Q5H8B9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frem3Q5H8B9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.32■■□□□ 1
Frem3Q5H8B9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frem3Q5H8B9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Frem3Q5H8B9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Frem3Q5H8B9 Gm8493-201ENSMUST00000196881 489 ntBASIC21.31■■□□□ 1
Frem3Q5H8B9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frem3Q5H8B9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Frem3Q5H8B9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.3■■□□□ 1
Frem3Q5H8B9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frem3Q5H8B9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
Frem3Q5H8B9 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.3■■□□□ 1
Frem3Q5H8B9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.3■■□□□ 1
Frem3Q5H8B9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.3■■□□□ 1
Frem3Q5H8B9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frem3Q5H8B9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.29■■□□□ 1
Frem3Q5H8B9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frem3Q5H8B9 Gm26571-201ENSMUST00000181399 666 ntBASIC21.29■■□□□ 1
Frem3Q5H8B9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.29■■□□□ 1
Frem3Q5H8B9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Frem3Q5H8B9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frem3Q5H8B9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.29■■□□□ 1
Frem3Q5H8B9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.29■■□□□ 1
Frem3Q5H8B9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.28■■□□□ 1
Frem3Q5H8B9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.28■■□□□ 1
Frem3Q5H8B9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Frem3Q5H8B9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frem3Q5H8B9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frem3Q5H8B9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Frem3Q5H8B9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frem3Q5H8B9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frem3Q5H8B9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frem3Q5H8B9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frem3Q5H8B9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Frem3Q5H8B9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Frem3Q5H8B9 Gm5874-201ENSMUST00000096101 508 ntBASIC21.26■□□□□ 0.99
Frem3Q5H8B9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frem3Q5H8B9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.26■□□□□ 0.99
Frem3Q5H8B9 Gm43530-201ENSMUST00000195920 274 ntBASIC21.26■□□□□ 0.99
Frem3Q5H8B9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Frem3Q5H8B9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frem3Q5H8B9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Frem3Q5H8B9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Frem3Q5H8B9 Spcs1-204ENSMUST00000226782 949 ntBASIC21.24■□□□□ 0.99
Frem3Q5H8B9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Frem3Q5H8B9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Frem3Q5H8B9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Frem3Q5H8B9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.23■□□□□ 0.99
Frem3Q5H8B9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Frem3Q5H8B9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frem3Q5H8B9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Frem3Q5H8B9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms