Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn2bQ56A07 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn2bQ56A07 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Scn2bQ56A07 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Scn2bQ56A07 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn2bQ56A07 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn2bQ56A07 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn2bQ56A07 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.51■□□□□ 0.87
Scn2bQ56A07 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Gm5921-201ENSMUST00000075898 882 ntBASIC20.51■□□□□ 0.87
Scn2bQ56A07 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn2bQ56A07 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn2bQ56A07 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Scn2bQ56A07 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn2bQ56A07 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scn2bQ56A07 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn2bQ56A07 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn2bQ56A07 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn2bQ56A07 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn2bQ56A07 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn2bQ56A07 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Scn2bQ56A07 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Notumos-201ENSMUST00000151998 2659 ntBASIC20.48■□□□□ 0.87
Scn2bQ56A07 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn2bQ56A07 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn2bQ56A07 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn2bQ56A07 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn2bQ56A07 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn2bQ56A07 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Scn2bQ56A07 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.46■□□□□ 0.87
Scn2bQ56A07 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn2bQ56A07 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.45■□□□□ 0.86
Scn2bQ56A07 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.45■□□□□ 0.86
Scn2bQ56A07 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn2bQ56A07 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Scn2bQ56A07 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Scn2bQ56A07 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn2bQ56A07 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn2bQ56A07 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Scn2bQ56A07 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn2bQ56A07 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms