Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rc3h1Q4VGL6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Rc3h1Q4VGL6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rc3h1Q4VGL6 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.23■■□□□ 1.47
Rc3h1Q4VGL6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rc3h1Q4VGL6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rc3h1Q4VGL6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rc3h1Q4VGL6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rc3h1Q4VGL6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rc3h1Q4VGL6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rc3h1Q4VGL6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rc3h1Q4VGL6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rc3h1Q4VGL6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rc3h1Q4VGL6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rc3h1Q4VGL6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rc3h1Q4VGL6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC24.21■■□□□ 1.47
Rc3h1Q4VGL6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rc3h1Q4VGL6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rc3h1Q4VGL6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rc3h1Q4VGL6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rc3h1Q4VGL6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.19■■□□□ 1.46
Rc3h1Q4VGL6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.19■■□□□ 1.46
Rc3h1Q4VGL6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Gm9870-201ENSMUST00000063874 645 ntBASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Rc3h1Q4VGL6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rc3h1Q4VGL6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Rc3h1Q4VGL6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rc3h1Q4VGL6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rc3h1Q4VGL6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rc3h1Q4VGL6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rc3h1Q4VGL6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rc3h1Q4VGL6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rc3h1Q4VGL6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC24.15■■□□□ 1.46
Rc3h1Q4VGL6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rc3h1Q4VGL6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rc3h1Q4VGL6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rc3h1Q4VGL6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rc3h1Q4VGL6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rc3h1Q4VGL6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Rc3h1Q4VGL6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rc3h1Q4VGL6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
Rc3h1Q4VGL6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Rc3h1Q4VGL6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rc3h1Q4VGL6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rc3h1Q4VGL6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rc3h1Q4VGL6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rc3h1Q4VGL6 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.14■■□□□ 1.45
Rc3h1Q4VGL6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rc3h1Q4VGL6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rc3h1Q4VGL6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rc3h1Q4VGL6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rc3h1Q4VGL6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rc3h1Q4VGL6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.12■■□□□ 1.45
Rc3h1Q4VGL6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Rc3h1Q4VGL6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rc3h1Q4VGL6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rc3h1Q4VGL6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rc3h1Q4VGL6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rc3h1Q4VGL6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rc3h1Q4VGL6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.09■■□□□ 1.45
Rc3h1Q4VGL6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rc3h1Q4VGL6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rc3h1Q4VGL6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC24.08■■□□□ 1.45
Rc3h1Q4VGL6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Rc3h1Q4VGL6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.08■■□□□ 1.45
Rc3h1Q4VGL6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rc3h1Q4VGL6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rc3h1Q4VGL6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rc3h1Q4VGL6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rc3h1Q4VGL6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rc3h1Q4VGL6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Rc3h1Q4VGL6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms