Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf223Q3UV31 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.3■□□□□ 0.84
Rnf223Q3UV31 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf223Q3UV31 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf223Q3UV31 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf223Q3UV31 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf223Q3UV31 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.29■□□□□ 0.84
Rnf223Q3UV31 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf223Q3UV31 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf223Q3UV31 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf223Q3UV31 Gm9870-201ENSMUST00000063874 645 ntBASIC20.29■□□□□ 0.84
Rnf223Q3UV31 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf223Q3UV31 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rnf223Q3UV31 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf223Q3UV31 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.28■□□□□ 0.84
Rnf223Q3UV31 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.28■□□□□ 0.84
Rnf223Q3UV31 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.28■□□□□ 0.84
Rnf223Q3UV31 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf223Q3UV31 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf223Q3UV31 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rnf223Q3UV31 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf223Q3UV31 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.27■□□□□ 0.84
Rnf223Q3UV31 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.27■□□□□ 0.84
Rnf223Q3UV31 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf223Q3UV31 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rnf223Q3UV31 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf223Q3UV31 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rnf223Q3UV31 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Gm15039-201ENSMUST00000118914 875 ntBASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf223Q3UV31 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf223Q3UV31 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf223Q3UV31 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf223Q3UV31 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf223Q3UV31 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf223Q3UV31 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf223Q3UV31 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf223Q3UV31 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf223Q3UV31 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf223Q3UV31 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf223Q3UV31 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rnf223Q3UV31 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf223Q3UV31 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Gm7143-201ENSMUST00000222811 859 ntBASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf223Q3UV31 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Rnf223Q3UV31 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 172.2 ms