Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsmem1Q3UQS2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lsmem1Q3UQS2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.21■□□□□ 0.99
Lsmem1Q3UQS2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.21■□□□□ 0.99
Lsmem1Q3UQS2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsmem1Q3UQS2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsmem1Q3UQS2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Lsmem1Q3UQS2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.2■□□□□ 0.98
Lsmem1Q3UQS2 Gm7417-201ENSMUST00000192950 473 ntBASIC21.2■□□□□ 0.98
Lsmem1Q3UQS2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.2■□□□□ 0.98
Lsmem1Q3UQS2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsmem1Q3UQS2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.19■□□□□ 0.98
Lsmem1Q3UQS2 Rps24-207ENSMUST00000224568 714 ntBASIC21.19■□□□□ 0.98
Lsmem1Q3UQS2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.19■□□□□ 0.98
Lsmem1Q3UQS2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsmem1Q3UQS2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsmem1Q3UQS2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsmem1Q3UQS2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Gm14117-201ENSMUST00000122417 843 ntBASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsmem1Q3UQS2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsmem1Q3UQS2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Lsmem1Q3UQS2 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.14■□□□□ 0.98
Lsmem1Q3UQS2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.14■□□□□ 0.98
Lsmem1Q3UQS2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lsmem1Q3UQS2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.14■□□□□ 0.98
Lsmem1Q3UQS2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsmem1Q3UQS2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lsmem1Q3UQS2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsmem1Q3UQS2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsmem1Q3UQS2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsmem1Q3UQS2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsmem1Q3UQS2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsmem1Q3UQS2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsmem1Q3UQS2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lsmem1Q3UQS2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsmem1Q3UQS2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsmem1Q3UQS2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsmem1Q3UQS2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.09■□□□□ 0.97
Lsmem1Q3UQS2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.09■□□□□ 0.97
Lsmem1Q3UQS2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lsmem1Q3UQS2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsmem1Q3UQS2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsmem1Q3UQS2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Lsmem1Q3UQS2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.08■□□□□ 0.97
Lsmem1Q3UQS2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsmem1Q3UQS2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms