Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.75■□□□□ 0.75
Spg11Q3UHA3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Spg11Q3UHA3 Gm12527-201ENSMUST00000117967 564 ntBASIC19.75■□□□□ 0.75
Spg11Q3UHA3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.75■□□□□ 0.75
Spg11Q3UHA3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Spg11Q3UHA3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Spg11Q3UHA3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.74■□□□□ 0.75
Spg11Q3UHA3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.74■□□□□ 0.75
Spg11Q3UHA3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Spg11Q3UHA3 Smad6-203ENSMUST00000179458 273 ntBASIC19.73■□□□□ 0.75
Spg11Q3UHA3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Spg11Q3UHA3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.73■□□□□ 0.75
Spg11Q3UHA3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Spg11Q3UHA3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.73■□□□□ 0.75
Spg11Q3UHA3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Spg11Q3UHA3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Spg11Q3UHA3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Spg11Q3UHA3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Spg11Q3UHA3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Spg11Q3UHA3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.72■□□□□ 0.75
Spg11Q3UHA3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.72■□□□□ 0.75
Spg11Q3UHA3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.71■□□□□ 0.75
Spg11Q3UHA3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Spg11Q3UHA3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Spg11Q3UHA3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Spg11Q3UHA3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Spg11Q3UHA3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Spg11Q3UHA3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Spg11Q3UHA3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.7■□□□□ 0.74
Spg11Q3UHA3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.7■□□□□ 0.74
Spg11Q3UHA3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Spg11Q3UHA3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Spg11Q3UHA3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Spg11Q3UHA3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Spg11Q3UHA3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.69■□□□□ 0.74
Spg11Q3UHA3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Spg11Q3UHA3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Spg11Q3UHA3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Spg11Q3UHA3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Spg11Q3UHA3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Spg11Q3UHA3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Spg11Q3UHA3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Spg11Q3UHA3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.66■□□□□ 0.74
Spg11Q3UHA3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Spg11Q3UHA3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Spg11Q3UHA3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Spg11Q3UHA3 Amer2-203ENSMUST00000225247 2662 ntBASIC19.66■□□□□ 0.74
Spg11Q3UHA3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Gm20760-201ENSMUST00000179197 648 ntBASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Gm4968-201ENSMUST00000071458 858 ntBASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.65■□□□□ 0.74
Spg11Q3UHA3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
Spg11Q3UHA3 Mir6982-201ENSMUST00000184354 68 ntBASIC19.64■□□□□ 0.73
Spg11Q3UHA3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
Spg11Q3UHA3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.63■□□□□ 0.73
Spg11Q3UHA3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.63■□□□□ 0.73
Spg11Q3UHA3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Spg11Q3UHA3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Gm8520-201ENSMUST00000186517 868 ntBASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Spg11Q3UHA3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.62■□□□□ 0.73
Spg11Q3UHA3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Spg11Q3UHA3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Spg11Q3UHA3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Spg11Q3UHA3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Spg11Q3UHA3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.6■□□□□ 0.73
Spg11Q3UHA3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Spg11Q3UHA3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.6■□□□□ 0.73
Spg11Q3UHA3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.6■□□□□ 0.73
Spg11Q3UHA3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 243.6 ms