Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.48■□□□□ 0.39
Ssbp4Q3U4B1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp4Q3U4B1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.48■□□□□ 0.39
Ssbp4Q3U4B1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.48■□□□□ 0.39
Ssbp4Q3U4B1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ssbp4Q3U4B1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssbp4Q3U4B1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ssbp4Q3U4B1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssbp4Q3U4B1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ssbp4Q3U4B1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssbp4Q3U4B1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ssbp4Q3U4B1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssbp4Q3U4B1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssbp4Q3U4B1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ssbp4Q3U4B1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ssbp4Q3U4B1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssbp4Q3U4B1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ssbp4Q3U4B1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssbp4Q3U4B1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssbp4Q3U4B1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp4Q3U4B1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 Gm7143-201ENSMUST00000222811 859 ntBASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Ssbp4Q3U4B1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp4Q3U4B1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 Gm27454-201ENSMUST00000185090 204 ntBASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp4Q3U4B1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms